Payroll & HRIS Operations3 min readUpdated September 2026

Rippling vs Gusto for Firms Billing Time Across Funding Sources

A life sciences or biotech consulting firm often splits a single staff member's week across several buckets: billable client work, a grant-funded research collaboration, and internal business development, each of which may need to be documented separately for very different reasons. A client wants an accurate invoice, a grant funder wants time allocation that supports their reporting requirements, and neither of those documentation needs looks anything like standard payroll.

Right now, that allocation is usually reconstructed from timesheets after the fact rather than captured as the work happens, which means payroll and project accounting run on two different versions of the same underlying reality.

Vendors Covered in this Article

Disclosure: We may earn a commission if you buy through some links on this page. It doesn't change what we recommend.

Why time allocation here is harder than standard time tracking

Most time tracking software assumes a worker's hours belong to one client or project at a time. A scientist splitting a Tuesday between a paid client engagement, a grant-funded study, and an internal proposal needs each segment recorded separately, sometimes to satisfy a federal grant's effort reporting requirements, which carry real audit consequences if the documentation doesn't hold up. Getting this wrong isn't just an internal accuracy problem, it can jeopardize a funder relationship or trigger a repayment obligation on misallocated grant funds.

What Gusto handles and where it stops

Gusto pays staff accurately based on whatever hours or salary you enter, but it isn't built to capture or categorize the underlying project allocation that produced those hours. For a firm with simple, mostly billable work, that's not a real gap, someone logs hours in a separate project tracking tool and payroll just needs the total. For a firm splitting time across funding sources with real reporting obligations attached, that separation between payroll and project data becomes the exact place errors creep in.

How Rippling's time tracking connects to project accounting

Rippling's time and attendance tools can be configured with project or cost-center codes, so a staff member logging hours against a specific grant or client engagement generates data that feeds both payroll and project accounting from the same entry, rather than requiring separate systems to somehow reconcile after the fact. That single-entry approach matters most for a firm juggling multiple funding sources with different documentation standards, since it reduces the chance that payroll's numbers and the grant report's numbers quietly diverge.

What no platform will do for you here

Neither Rippling nor Gusto understands the specific effort reporting standards a given federal grant requires, that knowledge has to live with whoever manages grant compliance at the firm, typically informed by the funding agency's own guidance. What a well-configured platform can do is make sure the underlying time data is clean and consistently categorized enough that producing a compliant effort report doesn't require reconstructing anyone's week from memory or a stack of sticky notes.

Sizing the investment to your actual funding mix

A firm doing almost entirely fixed-fee or hourly client billing, with little or no grant-funded work, doesn't need much beyond standard time tracking and Gusto handles that well. A firm where grant-funded research is a meaningful and growing share of revenue, with real effort reporting obligations attached, gets more direct value from Rippling's project-coded time tracking, since the cost of a documentation failure on a grant is considerably higher than the cost of a slightly more expensive payroll platform.

It's worth running this calculation explicitly rather than guessing: estimate what a single failed effort reporting audit would actually cost, in repayment risk, staff time spent responding, and reputational damage with the funder, and compare that to the incremental cost of better time tracking across a year. For most firms with meaningful grant revenue, that comparison isn't close, the downside of getting documentation wrong dwarfs what better tooling costs to prevent it.

Signs a firm has outgrown basic time tracking:

  • Grant-funded research has become a meaningful share of staff time rather than an occasional project.
  • Staff regularly split a single day across client work, grant work and internal proposals that each need separate documentation.
  • Payroll and project accounting keep producing two versions of the same hours because allocation is rebuilt from timesheets after the fact.
  • A funder's effort reporting requirements can't be met from the hours the current system captures.
  • Nobody at the firm owns grant compliance or has read the funding agency's guidance for the award.

A worked example: a ten-person firm with a new NIH grant

Say a ten-person biotech consulting firm that's historically done only fixed-fee client work just won its first NIH-funded research collaboration. Before that grant started, time tracking existed mainly to support client invoicing, and payroll ran on straightforward salaried pay with little need for project-level detail. The grant changes that immediately: several staff now split time between client billable work and the grant, and the firm needs to certify effort levels that hold up if NIH ever audits the award.

Firms in this position often underestimate how much lead time it takes to get time tracking configured correctly before the grant's first reporting period closes. Building the project codes, training staff to log time consistently against them, and confirming the resulting reports actually satisfy the funder's format is worth doing in the grant's first few weeks, not scrambled together right before the first report is due.

Executive Capability Standard

What Good Looks Like

A firm that has this right can produce an accurate, defensible time allocation for any staff member across every project and funding source they touched in a given period, without reconstructing it from memory when a client invoice or grant report is due.

Building The Capability (5-Stage Skill Ladder)

1. Learn:Understand the specific effort reporting or time allocation requirements attached to each grant or contract your firm holds, since they vary by funder.
2. Do Manually:Have staff log time against project or funding-source codes consistently, with a documented standard for how to split ambiguous hours across categories.
3. Delegate:Give a finance or grants administrator ownership of reconciling logged time against each funder's reporting requirements before submission.
4. Automate:Configure time tracking to capture project and funding-source codes at the point of entry so payroll and project accounting draw from the same clean data.
5. Buy:Adopt a platform with project-coded time tracking once grant-funded work is a large enough share of revenue that documentation errors carry real funder risk.

How to Get Started

Disclosure: We may earn a commission if you buy through some links on this page. It doesn't change what we recommend.

Frequently Asked Questions

What is effort reporting and why does it matter for grant-funded work?

Effort reporting documents the percentage of a researcher's paid time spent on a specific federally funded project, required to demonstrate the grant funds were used as intended. Inaccurate effort reporting can trigger funding agency audits and, in serious cases, repayment obligations for misallocated funds.

Can time logged for effort reporting also be used for client billing?

The underlying hours can inform both, but the reporting requirements differ, a client invoice needs to be accurate and defensible to the client, while effort reporting has to meet the specific funder's format and certification requirements. Keep both processes fed by the same accurate time data, but don't assume one document satisfies both purposes.

Who should own grant compliance if the firm doesn't have a dedicated grants administrator?

In a smaller firm, this often falls to whoever manages finance or operations, working directly from the specific funding agency's guidance for that grant. It's worth having that person review requirements at the start of each new grant rather than assuming prior grants followed identical rules.

About the numbers

This guide doesn't quote a sourced benchmark. Figures in it are estimates or general guidance, so check them against your own numbers.

Related Guides